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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50177705_50199763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50177705 - 50199763

Intron Length:

22059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CTTGTCTTACAG

Flanking Amino Acid:

SALLGIPLDQINFVACQLFA

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

0.81

0.8

79.9

32.3

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

48.2

-0.2

1.9

55.39

46.1

Associated Gene:

Gene:

MBOAT1

Ensembl Gene ID:

ENSAPLG00000005879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019657

50177396 - 50232275

54880

ENSAPLT00000006114

50177396 - 50230458

53063