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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50214284_50217518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50214284 - 50217518

Intron Length:

3235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AGCTTTTGAAAA

Flanking Amino Acid:

ITTLACQLHDGIGRQAEELT

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.9

42.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

85.3

0.8

84.4

30.5

Minor 5ss

32.1

-2

3.1

40.5

45.5

Minor BPS

49.1

-0

1.5

56.14

36.6

Associated Gene:

Gene:

MBOAT1

Ensembl Gene ID:

ENSAPLG00000005879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006114

50177396 - 50230458

53063

ENSAPLT00000019657

50177396 - 50232275

54880