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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50223952_50226893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50223952 - 50226893

Intron Length:

2942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTCATGTGAACT

Flanking Amino Acid:

LSNLNIWNIETATSFKMYIE

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.3

0.64

0.7

77.2

30.8

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

2.2

72.97

43.9

Associated Gene:

Gene:

MBOAT1

Ensembl Gene ID:

ENSAPLG00000005879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019657

50177396 - 50232275

54880

ENSAPLT00000006114

50177396 - 50230458

53063