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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50340397_50340842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50340397 - 50340842

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CGTTGCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTAAC

U12 Branch Point Sequence:

CCCCCCGTAACT

Flanking Amino Acid:

TPLTALNTDPAGSVNKPGDS

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.2

40.5

Major BPS

49.8

-0

1.2

52.9

39.1

Major PPT

71.4

0.48

65.1

41.2

Minor 5ss

32.6

-2

3.5

48.2

47.4

Minor BPS

52.5

0.16

2.1

68.71

Associated Gene:

Gene:

ID4

Ensembl Gene ID:

ENSAPLG00000029275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037725

50340338 - 50341220

883