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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50504422_50504674_F

Intron Information:

Intron Rank:

142631

Intron Class:

major

Intron Phase:

Intron Coordinates:

50504422 - 50504674

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAA

U12 Branch Point Sequence:

GGTCCCTTGAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

72.1

33.4

Major BPS

62.3

0.31

1.1

54.9

40.8

Major PPT

75.3

0.57

0.8

70.1

30.8

Minor 5ss

46.7

-0.3

2.4

43.5

Minor BPS

57.2

0.08

1.6

59.48

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039421

50405620 - 50505981

100362