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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50752679_50768274_F

Intron Information:

Intron Rank:

142206

Intron Class:

major

Intron Phase:

Intron Coordinates:

50752679 - 50768274

Intron Length:

15596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAGCGA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAG

U12 Branch Point Sequence:

TTTTTCTTCTCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

53.9

44.9

Major BPS

41.5

-0.5

1.6

49.7

Major PPT

92.7

0.96

0.6

92.4

17.8

Minor 5ss

-2.4

3.3

29.8

43.1

Minor BPS

46.6

-0.2

3.6

78.51

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045035

50740676 - 50768508

27833