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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50833978_50835918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50833978 - 50835918

Intron Length:

1941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

CTTCTCTTACAG

Flanking Amino Acid:

FCWYCLQNLDNDIFLRHYDK

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

69.2

0.48

37.1

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

49.4

-0.1

1.8

57.38

44.1

Associated Gene:

Gene:

RNF144B

Ensembl Gene ID:

ENSAPLG00000006037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033723

50833554 - 50883425

49872

ENSAPLT00000006271

50833554 - 50874379

40826