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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50844378_50852957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50844378 - 50852957

Intron Length:

8580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCAACA

5'SS Class:

major

3'SS Sequence:

TCTCTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTGTTCCTAATG

Flanking Amino Acid:

LNHGTLQEAEIACLVPVDQF

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.2

38.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

84.1

0.77

0.8

81.5

28.8

Minor 5ss

45.4

-0.5

2.6

59.1

45.1

Minor BPS

60.8

0.2

1.7

67.37

40.8

Associated Gene:

Gene:

RNF144B

Ensembl Gene ID:

ENSAPLG00000006037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033723

50833554 - 50883425

49872

ENSAPLT00000006271

50833554 - 50874379

40826