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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50865701_50882013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50865701 - 50882013

Intron Length:

16313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GATATTTCAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

93.6

0.98

0.6

92.4

17.8

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

46.6

-0.1

1.7

62.8

41.1

Associated Gene:

Gene:

RNF144B

Ensembl Gene ID:

ENSAPLG00000006037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033723

50833554 - 50883425

49872