Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_50882634_50883312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50882634 - 50883312

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGGG

5'SS Class:

major

3'SS Sequence:

ACTTTGCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TGCTCGTGAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.2

58.2

46.8

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

76.9

0.61

0.8

36.1

Minor 5ss

36.6

-1.5

3.4

49.7

46.5

Minor BPS

45.8

-0.3

2.4

59.68

45.2

Associated Gene:

Gene:

RNF144B

Ensembl Gene ID:

ENSAPLG00000006037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033723

50833554 - 50883425

49872