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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50915557_50917325_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
50915557 - 50917325

Intron Length:
1769

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTACTTGTT

5'SS Class:
major

3'SS Sequence:
CCGTATTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGTCAT

U12 Branch Point Sequence:
TTTAAGGAAACC

Flanking Amino Acid:
EEEEEEEEEKEKSLIVEGKR

Intron Amino Acid Position:
46

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.8
0.44
1.1
69.2
41.7

Major BPS
76
0.65
1.1
77.4
37.3

Major PPT
78.3
0.64
0.9
72.2
37.5

Minor 5ss
37.2
-1.4
3.6
49.3
46.9

Minor BPS
38.4
-0.9
2.7
59.68
45.2

Associated Gene:

Gene:
DEK

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

50915410 - 50930818
15409

50915410 - 50931551
16142