Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_50922444_50923502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50922444 - 50923502

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATAC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CCTACTTGAATA

Flanking Amino Acid:

FLMHPKSSGKPLPKSKKTPS

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.3

26.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

74.9

0.56

0.8

71.9

32.7

Minor 5ss

32.8

-2

40.8

45.7

Minor BPS

54.3

0.13

1.5

60.32

40.3

Associated Gene:

Gene:

DEK

Ensembl Gene ID:

ENSAPLG00000006721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040153

50915410 - 50930818

15409

ENSAPLT00000007007

50915410 - 50931551

16142