Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_50941171_50942988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50941171 - 50942988

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGATTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

TTTACCTTGATT

Flanking Amino Acid:

TVLRELFKEQEVPDPVKFFV

Intron Amino Acid Position:

751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

71.5

0.53

1.1

43.2

Major PPT

70.8

0.47

64.8

40.2

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

80.6

1.04

1.1

92.09

30.2

Associated Gene:

Gene:

KDM1B

Ensembl Gene ID:

ENSAPLG00000006476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006731

50940362 - 50967130

26769

ENSAPLT00000026285

50940362 - 50966620

26259