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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50947708_50949124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50947708 - 50949124

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

AGCTAGTTATGT

Flanking Amino Acid:

EYACGSNLSQVSARSWDHNE

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

72.3

0.5

0.9

65.1

36.4

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

39.2

-0.7

2.4

55.66

46.2

Associated Gene:

Gene:

KDM1B

Ensembl Gene ID:

ENSAPLG00000006476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026285

50940362 - 50966620

26259

ENSAPLT00000006731

50940362 - 50967130

26769