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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50952031_50953415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50952031 - 50953415

Intron Length:

1385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CATTCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATTTCCTGAACT

Flanking Amino Acid:

ARQLHNFGIKVIVLEAKDRI

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

74.3

0.55

0.9

67.9

37.3

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

83.7

1.14

1.2

95.92

29.1

Associated Gene:

Gene:

KDM1B

Ensembl Gene ID:

ENSAPLG00000006476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026285

50940362 - 50966620

26259

ENSAPLT00000006731

50940362 - 50967130

26769