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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50959944_50960723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50959944 - 50960723

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGACTGG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GCTGTTTTATTT

Flanking Amino Acid:

CNECFDHYYRSHKDGYEKYT

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

53.9

45.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.7

0.78

0.6

84.6

23.1

Minor 5ss

41.2

-1

3.3

55.4

48.8

Minor BPS

49.1

0.01

1.7

63.03

42.4

Associated Gene:

Gene:

KDM1B

Ensembl Gene ID:

ENSAPLG00000006476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006731

50940362 - 50967130

26769

ENSAPLT00000026285

50940362 - 50966620

26259