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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50966147_50966299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

50966147 - 50966299

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCCT

U12 Branch Point Sequence:

TTCCCCTTCCCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

34.6

-0.9

4.2

73.6

41.8

Major PPT

0.58

0.7

25.2

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

-0.3

3.6

77.05

45.4

Associated Gene:

Gene:

KDM1B

Ensembl Gene ID:

ENSAPLG00000006476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026285

50940362 - 50966620

26259