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Intron Name: Anas_platyrhynchos_platyrhynchos_2_50966729_50967438_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50966729 - 50967438

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTATGGCAC

5'SS Class:

weak_major

3'SS Sequence:

TGTTCTTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

TGGTTCAGCACA

Flanking Amino Acid:

TAAFHKEHGHPLLEKYLDVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.4

47.9

42.6

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

81.8

0.71

0.8

77.1

31.6

Minor 5ss

-1.2

3.3

54.4

43.4

Minor BPS

43.8

-0.4

2.1

57.55

41.6

Associated Gene:

Gene:

TPMT

Ensembl Gene ID:

ENSAPLG00000006294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006561

50966589 - 50976258

9670