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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51098730_51099567_F


Intron Information:

Intron Rank:
32

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51098730 - 51099567

Intron Length:
838

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATTGC

5'SS Class:
strong_major

3'SS Sequence:
ACTTGCAATTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
AAAAACTTAAAT

Flanking Amino Acid:
TYEIVSNIPKATEEIEDRET

Intron Amino Acid Position:
1314

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.6
0.84
0.9
75.6
35.3

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
63.9
0.31
1
60.4
40

Minor 5ss
39.9
-1.1
2.9
53
44.2

Minor BPS
54.6
0.22
1.7
68.59
40.8

Associated Gene:

Gene:
KIF13A

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

50996873 - 51108705
111833

50996873 - 51108705
111833