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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51099721_51100641_F


Intron Information:

Intron Rank:
33

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51099721 - 51100641

Intron Length:
921

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGAAA

5'SS Class:
strong_major

3'SS Sequence:
TTCTTCTACACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ACTATTTTAATA

Flanking Amino Acid:
NILSLERLRQAVTVKEALST

Intron Amino Acid Position:
1365

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
84
28.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
80.3
0.68
0.8
76.4
31.2

Minor 5ss
31.6
-2.1
3.1
39
46.4

Minor BPS
62.8
0.4
1.2
65.4
35.5

Associated Gene:

Gene:
KIF13A

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

50996873 - 51108705
111833

50996873 - 51108705
111833