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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51153804_51161912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51153804 - 51161912

Intron Length:

8109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTACTTTAATT

Flanking Amino Acid:

SQNNLRVHYKGHGKTPKDAA

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

100

1.24

0.5

100

Major PPT

90.7

0.92

0.7

27.2

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

77.4

0.94

1.1

87.04

32.2

Associated Gene:

Gene:

RANBP9

Ensembl Gene ID:

ENSAPLG00000004706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020061

51124724 - 51167332

42609

ENSAPLT00000004862

51124724 - 51164864

40141