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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51206350_51208750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51206350 - 51208750

Intron Length:

2401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTCA

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGTAT

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

YKDMVTKVQQEIALQQVMSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.3

68.6

39.2

Major BPS

53.8

0.09

1.6

57.4

49.1

Major PPT

80.4

0.68

81.8

27.5

Minor 5ss

39.5

-1.2

2.8

48.8

46.9

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036017

51204682 - 51210645

5964