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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51295985_51298035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51295985 - 51298035

Intron Length:

2051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CAATTTTAAACT

Flanking Amino Acid:

FYLLLIFFTCTCLRKESMSP

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.1

0.7

0.9

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

55.8

0.26

1.7

68.93

42.3

Associated Gene:

Gene:

CD83

Ensembl Gene ID:

ENSAPLG00000020318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035504

51286782 - 51299862

13081

ENSAPLT00000001491

51287006 - 51298191

11186