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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51508072_51509810_R

Intron Information:

Intron Rank:

142071

Intron Class:

major

Intron Phase:

Intron Coordinates:

51508072 - 51509810

Intron Length:

1739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGAAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

AAAACACTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.9

43.2

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

29.6

-2.3

3.4

38.2

Minor BPS

45.7

-0.3

1.9

54.39

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023769

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035903

51507112 - 51510209

3098