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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51544850_51546706_R

Intron Information:

Intron Rank:

145094

Intron Class:

major

Intron Phase:

Intron Coordinates:

51544850 - 51546706

Intron Length:

1857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

ATTGATCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCTTCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

72.5

39.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.4

0.62

0.9

69.6

40.8

Minor 5ss

41.1

-1

3.1

48.2

47.3

Minor BPS

83.3

1.12

91.07

32.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046449

51543085 - 51546789

3705