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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51799476_51812100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51799476 - 51812100

Intron Length:

12625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTAATGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTTTCTAATG

Flanking Amino Acid:

EDFLTFLCLRGSPALPSNMV

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

35.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.9

0.4

1.1

67.1

42.6

Minor 5ss

36.5

-1.5

3.2

50.8

45.8

Minor BPS

55.5

0.03

1.7

62.82

40.1

Associated Gene:

Gene:

JARID2

Ensembl Gene ID:

ENSAPLG00000004296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004438

51769955 - 51856174

86220