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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51840392_51840830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51840392 - 51840830

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTACAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

TKEPTVAEVEQEYWRLVEQK

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

70.4

35.4

Major BPS

74.2

0.6

39.4

Major PPT

78.2

0.64

0.9

74.6

33.7

Minor 5ss

26.8

-2.7

2.8

31.2

42.4

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

JARID2

Ensembl Gene ID:

ENSAPLG00000004296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004438

51769955 - 51856174

86220