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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51841167_51842003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51841167 - 51842003

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCATTTTCAATC

Flanking Amino Acid:

SILRHLGAVPGVTIPWLNIG

Intron Amino Acid Position:

855

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.6

41.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.7

0.58

0.9

73.5

36.4

Minor 5ss

38.9

-1.3

2.9

45.6

43.8

Minor BPS

56.2

0.17

1.5

62.42

37.7

Associated Gene:

Gene:

JARID2

Ensembl Gene ID:

ENSAPLG00000004296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004438

51769955 - 51856174

86220