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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51850402_51852393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51850402 - 51852393

Intron Length:

1992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGAAT

5'SS Class:

major

3'SS Sequence:

CCGATATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CAGTTACTAATT

Flanking Amino Acid:

STISSLLGELRDTELRQRRQ

Intron Amino Acid Position:

1033

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

78.6

37.2

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

67.8

0.4

60.4

39.3

Minor 5ss

39.5

-1.2

3.2

56.9

47.4

Minor BPS

46.9

-0.1

1.9

62.39

41.9

Associated Gene:

Gene:

JARID2

Ensembl Gene ID:

ENSAPLG00000004296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004438

51769955 - 51856174

86220