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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51854215_51855661_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51854215 - 51855661

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTACG

5'SS Class:

major

3'SS Sequence:

ACTTTCTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ACTTTCTGAACA

Flanking Amino Acid:

GLKMMYRYDEEQIISLVNQI

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

42.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

0.45

39.1

Minor 5ss

37.6

-1.4

2.4

43.7

43.5

Minor BPS

69.1

0.59

1.4

74.27

37.2

Associated Gene:

Gene:

JARID2

Ensembl Gene ID:

ENSAPLG00000004296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004438

51769955 - 51856174

86220