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Intron Name: Anas_platyrhynchos_platyrhynchos_2_51858575_51858977_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51858575 - 51858977

Intron Length:
403

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTTAGTGAT

5'SS Class:
major

3'SS Sequence:
TGCATGTTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
TATTAATGAACC

Flanking Amino Acid:
AVTERKGASDLLQ*

Intron Amino Acid Position:
325

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.2
75.5
33.8

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
76.5
0.6
1
72.6
42.2

Minor 5ss
33.1
-1.9
3.2
46.6
41.9

Minor BPS
54.8
0.13
1.9
71.56
38.4

Associated Gene:

Gene:
DTNBP1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51858284 - 51927163
68880

51858284 - 51927163
68880