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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52129010_52135123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52129010 - 52135123

Intron Length:

6114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCTCCCATATGT

Flanking Amino Acid:

RAMFPNHTIMAGNVVTGEMV

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

75.2

0.57

0.9

37.1

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

47.4

-0.1

2.1

70.26

46.2

Associated Gene:

Gene:

GMPR

Ensembl Gene ID:

ENSAPLG00000007973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008280

52121768 - 52154046

32279