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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52574326_52574557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52574326 - 52574557

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGATGGTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

TTTCCTGCTACC

Flanking Amino Acid:

SIPALGWIAVSPKPGPYVKE

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

85.8

25.5

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

62.9

0.29

54.1

45.7

Minor 5ss

-0.9

2.9

43.6

Minor BPS

-0.4

2.4

64.35

41.3

Associated Gene:

Gene:

CAP2

Ensembl Gene ID:

ENSAPLG00000007343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007649

52543165 - 52594771

51607