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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52574644_52576374_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52574644 - 52576374

Intron Length:

1731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCTCTTTTTACA

Flanking Amino Acid:

TNRVLKDYKHSDARHVDWVK

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.9

36.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

91.5

0.93

0.6

86.8

Minor 5ss

46.6

-0.3

2.5

61.6

43.3

Minor BPS

57.4

0.22

1.6

67.8

38.6

Associated Gene:

Gene:

CAP2

Ensembl Gene ID:

ENSAPLG00000007343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007649

52543165 - 52594771

51607