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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52587283_52588134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52587283 - 52588134

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGGAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

QLNQGEAITKGLRHVSDDQK

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

64.3

47.1

Major BPS

73.5

0.59

81.3

29.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

27.1

-2.6

2.9

31.6

42.3

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

CAP2

Ensembl Gene ID:

ENSAPLG00000007343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007649

52543165 - 52594771

51607