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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52593154_52594687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52593154 - 52594687

Intron Length:

1534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TGTTTCTTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTTCTTACCA

Flanking Amino Acid:

NVLIPQDGDYKEFPVPEQFK

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.4

35.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.7

0.69

0.9

74.5

40.1

Minor 5ss

-2.4

3.2

35.6

41.4

Minor BPS

70.9

0.65

1.6

79.59

36.6

Associated Gene:

Gene:

CAP2

Ensembl Gene ID:

ENSAPLG00000007343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007649

52543165 - 52594771

51607