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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52601795_52601836_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52601795 - 52601836

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCATTCCC

5'SS Class:

major

3'SS Sequence:

CCTGTGAGGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCCTAT

U12 Branch Point Sequence:

ATTCCCTCTACT

Flanking Amino Acid:

HPEPSLAQPEATPISSPPPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

70.4

Major BPS

56.4

0.16

1.3

56.1

41.3

Major PPT

43.2

-0.3

1.7

41.6

Minor 5ss

20.6

-3.4

3.4

28.8

35.3

Minor BPS

59.8

0.39

1.9

80.94

Associated Gene:

Gene:

FAM8A1

Ensembl Gene ID:

ENSAPLG00000020765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020073

52601750 - 52607225

5476