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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52602014_52602079_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

52602014 - 52602079

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCGGCTGC

5'SS Class:

major

3'SS Sequence:

GGCAGAAGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TCCTCCTCAGTC

Flanking Amino Acid:

MAEAGGGGPGALSAAEYARR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

1.3

50.2

43.1

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

41.6

-0.4

1.1

26.8

35.1

Minor 5ss

27.5

-2.6

32.5

42.5

Minor BPS

52.2

0.05

1.8

62.19

43.8

Associated Gene:

Gene:

FAM8A1

Ensembl Gene ID:

ENSAPLG00000020765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035366

52601882 - 52607225

5344