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Intron Name: Anas_platyrhynchos_platyrhynchos_2_52602433_52604718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52602433 - 52604718

Intron Length:

2286

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGTTTGTT

5'SS Class:

major

3'SS Sequence:

TCTTCATTTAGAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATTTAGA

Flanking Amino Acid:

PAGEWGLRAKSTPIWVTLTI

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

74.5

39.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

64.1

0.32

1.7

72.6

36.7

Minor 5ss

-2.4

4.2

48.8

47.4

Minor BPS

49.8

-0

2.2

68.43

43.6

Associated Gene:

Gene:

FAM8A1

Ensembl Gene ID:

ENSAPLG00000020765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035366

52601882 - 52607225

5344