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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5274948_5277092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5274948 - 5277092

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

CCCCCATTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCGTAT

U12 Branch Point Sequence:

TCCTCCCCCATT

Flanking Amino Acid:

PSSALTPSFTPTSILKKSKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.3

72.6

38.9

Major BPS

-0.1

1.4

45.3

39.5

Major PPT

71.8

0.49

0.8

68.8

30.4

Minor 5ss

36.7

-1.5

2.9

50.4

39.3

Minor BPS

44.7

-0.3

2.2

64.35

46.4

Associated Gene:

Gene:

CSRNP1

Ensembl Gene ID:

ENSAPLG00000001969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041206

5274752 - 5280461

5710

ENSAPLT00000001971

5274728 - 5279743

5016