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Intron Name: Anas_platyrhynchos_platyrhynchos_2_5311889_5312926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5311889 - 5312926

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAGAA

U12 Branch Point Sequence:

GAAATGTTAAGC

Flanking Amino Acid:

FIIAIGHTRLNKENNMLKDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

61.2

0.28

58.8

38.1

Major PPT

0.59

0.9

68.7

37.3

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

-0.5

2.2

49.52

40.3

Associated Gene:

Gene:

GORASP1

Ensembl Gene ID:

ENSAPLG00000012693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013224

5309886 - 5318546

8661