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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53176869_53177589_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53176869 - 53177589

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGCG

5'SS Class:

major

3'SS Sequence:

GTTTCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

GTTTCCTTTACA

Flanking Amino Acid:

LLGFAALPAEPWTVVPDFTH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

63.4

41.5

Major BPS

64.9

0.37

37.5

Major PPT

86.4

0.82

0.8

80.2

31.9

Minor 5ss

36.3

-1.6

3.3

48.3

47.4

Minor BPS

77.7

0.87

1.5

84.68

34.6

Associated Gene:

Gene:

PAK1IP1

Ensembl Gene ID:

ENSAPLG00000005241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005443

53176788 - 53184948

8161