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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53188113_53190341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53188113 - 53190341

Intron Length:

2229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTATTCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATCTCTTATTC

Flanking Amino Acid:

SGGLIGYAKAGSVPSLAAGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.7

0.53

0.9

66.1

39.8

Minor 5ss

43.2

-0.7

3.1

58.8

46.1

Minor BPS

0.29

1.6

68.62

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005638

53188037 - 53192240

4204