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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53209651_53211448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53209651 - 53211448

Intron Length:

1798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCAACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

GATTCCTGATTA

Flanking Amino Acid:

MRMLVEAVNKVFVLCWRCLY

Intron Amino Acid Position:

1051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.2

90.9

28.7

Major BPS

79.2

0.72

Major PPT

66.6

0.37

0.9

58.7

Minor 5ss

37.1

-1.5

2.8

51.6

44.9

Minor BPS

56.2

0.19

1.7

66.62

39.5

Associated Gene:

Gene:

NFX1

Ensembl Gene ID:

ENSAPLG00000005524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040886

53209143 - 53244815

35673

ENSAPLT00000032513

53206703 - 53244815

38113