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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53213288_53213524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53213288 - 53213524

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAAT

5'SS Class:

major

3'SS Sequence:

TGCTTGAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

CCTGCTTGAATT

Flanking Amino Acid:

DEECLALQRNRRLAEALEID

Intron Amino Acid Position:

995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

38.4

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

65.9

0.36

63.4

Minor 5ss

34.2

-1.8

3.2

47.3

48.3

Minor BPS

0.24

1.6

67.73

44.1

Associated Gene:

Gene:

NFX1

Ensembl Gene ID:

ENSAPLG00000005524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017975

53205573 - 53244815

39243

ENSAPLT00000005771

53200197 - 53244815

44619

ENSAPLT00000040886

53209143 - 53244815

35673

ENSAPLT00000039390

53200197 - 53244815

44619

ENSAPLT00000032513

53206703 - 53244815

38113