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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53217988_53218085_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53217988 - 53218085

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGGTGT

5'SS Class:

major

3'SS Sequence:

GTATTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATTTTAAACA

Flanking Amino Acid:

PCPTTSCSAKVDLHCECGRR

Intron Amino Acid Position:

923

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

62.5

44.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.6

0.4

1.1

62.5

Minor 5ss

33.4

-1.9

3.5

47.6

47.9

Minor BPS

55.6

0.17

1.6

63.13

37.1

Associated Gene:

Gene:

NFX1

Ensembl Gene ID:

ENSAPLG00000005524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032513

53206703 - 53244815

38113

ENSAPLT00000017975

53205573 - 53244815

39243

ENSAPLT00000005771

53200197 - 53244815

44619

ENSAPLT00000040886

53209143 - 53244815

35673

ENSAPLT00000039390

53200197 - 53244815

44619