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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53224410_53225965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53224410 - 53225965

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTAATTCTAATT

Flanking Amino Acid:

RHKCNEVCCVDTEHKCSLVC

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.1

0.54

0.8

66.1

35.9

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

54.7

0.23

1.6

73.72

37.3

Associated Gene:

Gene:

NFX1

Ensembl Gene ID:

ENSAPLG00000005524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032513

53206703 - 53244815

38113

ENSAPLT00000017975

53205573 - 53244815

39243

ENSAPLT00000005771

53200197 - 53244815

44619

ENSAPLT00000040886

53209143 - 53244815

35673

ENSAPLT00000039390

53200197 - 53244815

44619