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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53229433_53230530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53229433 - 53230530

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

TTCACTTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTCTTTAATT

Flanking Amino Acid:

CGKPLSCGSYEFLHTCESLC

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

63.5

42.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.1

0.48

68.4

37.3

Minor 5ss

-1.2

2.8

46.4

43.7

Minor BPS

86.2

1.21

0.8

94.15

26.1

Associated Gene:

Gene:

NFX1

Ensembl Gene ID:

ENSAPLG00000005524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039390

53200197 - 53244815

44619

ENSAPLT00000032513

53206703 - 53244815

38113

ENSAPLT00000017975

53205573 - 53244815

39243

ENSAPLT00000005771

53200197 - 53244815

44619

ENSAPLT00000040886

53209143 - 53244815

35673