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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53263129_53264313_F

Intron Information:

Intron Rank:

135527

Intron Class:

major

Intron Phase:

Intron Coordinates:

53263129 - 53264313

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACGG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

TTTTTGTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

59.1

45.6

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

81.3

0.71

0.9

82.3

34.1

Minor 5ss

31.5

-2.1

3.1

36.4

41.5

Minor BPS

55.3

0.25

2.3

83.03

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022604

53260619 - 53264435

3817

ENSAPLT00000021077

53261340 - 53264435

3096