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Intron Name: Anas_platyrhynchos_platyrhynchos_2_53267401_53268967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

53267401 - 53268967

Intron Length:

1567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTTTATGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.9

0.9

0.7

84.9

29.9

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

61.2

0.43

1.6

80.24

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044853

53266427 - 53298830

32404

ENSAPLT00000023616

53267342 - 53298830

31489